Insertion junction: CLIP2.074304_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074304
Chromosome:chromosome 3
Location:767694
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146087 (1 of 3) 1.14.11.33 - DNA oxidative demethylase / Alkylated DNA repair protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCCATAAAACTGGTTGTGTCCCATACGAGTGTCCTGACTTGCTGCGTG
Internal bar code:GTTAACATTTGGTCTGCCTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1525
LEAP-Seq percent confirming:76.4706
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:GTTAAGCGTGACTGGGTCCA
Suggested primer 2:GTCGCTGGTGTTCAAGGAGA