Insertion junction: CLIP2.074310_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.074310
Chromosome:chromosome 9
Location:5787984
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g411150 (1 of 6) PTHR22916//PTHR22916:SF9 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTATGGGCGTCAGCTGCACCCTACGGGACCTCGCCAACCTGCCTCAACC
Internal bar code:CGTTACGCGGAGGGCTCGGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:238
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCGCTCTACGGCATCATT
Suggested primer 2:TCAACCTCCTGAGCTGCATG