Insertion junction: CLIP2.074324_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074324
Chromosome:chromosome 9
Location:5706916
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410450 ROC15,ROC74 Rhythm Of Chloroplast 15; (1 of 4) IPR001005//IPR006447//IPR009057//IPR017930 - SANT/Myb domain // Myb domain, plants // Homeodomain-like // Myb domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAACAAAGCGCGAGGCAGTATTGCTGCACTTCCAAATACACCAATCTC
Internal bar code:CTATGCAGTTCTTTGGTCGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3144
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCAGAAGTACCGCATGA
Suggested primer 2:CTTCCACCAACACTGTTGCG