Insertion junction: CLIP2.074325_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074325
Chromosome:chromosome 3
Location:5500199
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184750 (1 of 1) PF08524 - rRNA processing (rRNA_processing) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCATGCAAGTGTACCGACACACGTGCACCTCGGCACCTGCACCTTTGC
Internal bar code:GAATGTTCTCAGTCGAAAAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3995
LEAP-Seq percent confirming:93.4211
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCCAACAATGCAGGCAA
Suggested primer 2:GGAGTGCAGCAACAAGAACG