Insertion junction: CLIP2.074328_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.074328
Chromosome:chromosome 13
Location:4519473
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603050 5'UTR
Cre13.g603100 GT90-48,GT90F48 GT90 family protein 48; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGAGCTGTTCTTTACAGTGGTACACAGGTGCGTACACATCTGGGCTTA
Internal bar code:GTCCTTCCAAATTGAACTTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1674
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATGCCGCTTCACATAAG
Suggested primer 2:CAGCGTTTGGAGGTTCAACG