Insertion junction: CLIP2.074331_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074331
Chromosome:chromosome 17
Location:5476097
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739100 (1 of 1) K10666 - E3 ubiquitin-protein ligase RNF5 (RNF5) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCCAAGCGAAAAGCAGGACGAGCGTGACTTCTACACAGCGCAGTTAA
Internal bar code:AAAGGTTTTGTGTCGGTCGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4875
LEAP-Seq percent confirming:99.0476
LEAP-Seq n confirming:104
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGAGCGACTGTTCACAA
Suggested primer 2:GCTCTTGCAGCGTTTGGAAA