Insertion junction: CLIP2.074333_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.074333
Chromosome:chromosome 9
Location:2052565
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396500 HAD3 Halo-acid dehalogenase-like hydrolase; (1 of 98) IPR023214 - HAD-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAATGTGTACAATATATCAAGAGGCCATGGGCAAGTTTATGTTATTGC
Internal bar code:ACCCGGGACGGGATTATTGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1730
LEAP-Seq percent confirming:43.4783
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTGCGATCTTGACTTCT
Suggested primer 2:GGTTGTTAACGTGTGTGGGC