Insertion junction: CLIP2.074336_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074336
Chromosome:chromosome 17
Location:2719959
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g802055 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGAGCGAGGAACAGGCGGAGGTGCGGGCGGCGAAGACATCGCGGGGT
Internal bar code:AACTCTGGTATGATGGTCGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:258
LEAP-Seq percent confirming:91.8919
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:AGCATGGGAATGGAAAGGCA
Suggested primer 2:ATGGACGCTGATGACGTTGT