Insertion junction: CLIP2.074344_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074344
Chromosome:chromosome 17
Location:3707071
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725950 CSR13 (1 of 3) K08106 - N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase (CHST15); Carbohydrate sulfotransferase-related 13 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCGGGCAGTGAGGAGCAGGGTTCGGGAAGGGTGTGAGATGCACGTGCG
Internal bar code:GTACCTTTCCCTGGGACGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3150
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCTGGCCCTACCGATGTA
Suggested primer 2:TTCCATCTCTGCCTCTCCGA