Insertion junction: CLIP2.074348_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.074348
Chromosome:chromosome 12
Location:220241
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g484800 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTATGGATGGGGAGGCCAACCGATGTGCTCGTGGCACCCCGTGACCCC
Internal bar code:ATTACGCGTTAAACCTCCGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:382
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGACATGGCTCAGTTCCAGC
Suggested primer 2:AGGAGCAGGAGAAGGAGGAG