Insertion junction: CLIP2.074352_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074352
Chromosome:chromosome 3
Location:4313644
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174300 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCGGCAGGATGTGACAAGGATGACCACGTTGGCAGCGAAAAGCGGACG
Internal bar code:GAACGGCCTCCTGCTTTTATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3099
LEAP-Seq percent confirming:86.1111
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTCCTTATCGAGCTCCTC
Suggested primer 2:CCTGATGGACATGCTGGTGT