Insertion junction: CLIP2.074354_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.074354
Chromosome:chromosome 17
Location:2377716
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g714200 KUP2,KUP6,KUP1 (1 of 5) K03549 - KUP system potassium uptake protein (kup); Potassium ion uptake transporter 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTACGCATTTTGAAGTGGAGGGCTGCTGAGGGCGAGCTTCGTAATCGTG
Internal bar code:TTTATGGATGGACGTTGTTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1289
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGGTATCGGGAGTACGG
Suggested primer 2:GTTCAAAGCCGGGGAACAAC