Insertion junction: CLIP2.074362_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074362
Chromosome:chromosome 1
Location:5700379
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g040801 (1 of 3) PTHR18937//PTHR18937:SF254 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACGTATGGGTGCGCCGCGCCCCCTGCGGGGGCCGGGGCACGCCAACCA
Internal bar code:TCGTGTAACATAGATATCATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4318
LEAP-Seq percent confirming:98.9474
LEAP-Seq n confirming:94
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTGACAGTCATGGAGCC
Suggested primer 2:CCGCGAGATACAGACTCCAC