Insertion junction: CLIP2.074363_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.074363
Chromosome:chromosome 2
Location:5976977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g118300 RHE,HEL12 (1 of 1) PTHR24031:SF330 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 7; DEAD box ATP-dependent RNA helicase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGGGTTTGCGCTTGCGCTGCGGATGTGCGGGCAGGTGGGGGGTTGCC
Internal bar code:ATATTGGTAAGTGTACTAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1218
LEAP-Seq percent confirming:89.7436
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGGTAGAGGTAGGGCAG
Suggested primer 2:TTGCTGTATGATGGCCCCAG