Insertion junction: CLIP2.074370_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074370
Chromosome:plastome
Location:190517
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802332 ChreCp067,2717046,psaC photosystem I iron-sulfur center; (1 of 1) K02691//K05575 - photosystem I subunit VII (psaC) // NAD(P)H-quinone oxidoreductase subunit 4 (ndhD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAATTGTTCACAGTCCGCATATTTTATTTGATCTTTTTGAGAAGATAAA
Internal bar code:CCTCAGACTATGAGAGGCAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:560
LEAP-Seq percent confirming:81.0811
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TTACGCTGTGTGGTCACCTC
Suggested primer 2:CTCCACGCACTGAAGACTGT