Insertion junction: CLIP2.074388_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.074388
Chromosome:chromosome 9
Location:2634343
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392106 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTACGTAGAAACTAATTTTGCCGCCATACTCGAAGGTAGGATTTAGGGT
Internal bar code:GATTTTAATGTTACTCATTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:949
LEAP-Seq percent confirming:39.1304
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACTTCTTCTGAGGGCTG
Suggested primer 2:TCCAGGTGAACGGGAAATGG