Insertion junction: CLIP2.074390_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.074390
Chromosome:chromosome 12
Location:8617250
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g548350 (1 of 16) IPR011044 - Quinoprotein amine dehydrogenase, beta chain-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGCGGCGGCGGGGCCGGGCTGAGAGCCTGAACGGCGCTAGCAGGGCG
Internal bar code:TGGGGACAGGCGGTCCCAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1324
LEAP-Seq percent confirming:15.3846
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGCAGGAACGTCATGAGG
Suggested primer 2:CACATGTCGCATGCTGTCAG