Insertion junction: CLIP2.074397_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.074397
Chromosome:chromosome 12
Location:8109652
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552400 (1 of 30) PF03407 - Nucleotide-diphospho-sugar transferase (Nucleotid_trans) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGCCGTAGAGGTCGGGTTCTCTCTTGCAGTCTCTCGCTGCTGCGAGT
Internal bar code:GACAATTTCACTTCACGCGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3278
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCCTTCTCGACGTTTGT
Suggested primer 2:ACTTTGGAATCTGGGGCTCG