Insertion junction: CLIP2.074399_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.074399
Chromosome:chromosome 12
Location:60718
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g483720 (1 of 2) PTHR10302//PTHR10302:SF8 - SINGLE-STRANDED DNA-BINDING PROTEIN // PROTEIN OSB2, CHLOROPLASTIC-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATCCCAACATCCCCGACTTCCGTAACAAAATGGATCGCGGCAAGGCGG
Internal bar code:GAGTGGTCGTAAGTCAACGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1012
LEAP-Seq percent confirming:39.0244
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CCATTTCTCAGGGTTCGCCT
Suggested primer 2:GCCACGTCTGTTACCCTCAA