Insertion junction: CLIP2.074401_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.074401
Chromosome:chromosome 16
Location:426516
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g693400 3'UTR
Cre16.g693450 ISG-C1 (1 of 32) IPR029062 - Class I glutamine amidotransferase-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGTAGGCGCCCATGCGGTGTGCACACGGGCACAGGATATGCGCTATGC
Internal bar code:TTTCAGCCGGAGCATCGTATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1803
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGCAATGCACATACTGAG
Suggested primer 2:GTTCGGTCATCGTCACCAGT