Insertion junction: CLIP2.074413_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.074413
Chromosome:chromosome 6
Location:2867208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g272450 OPR23,MBI1 psbI mRNA stabilization factor; (1 of 19) PTHR21228//PTHR21228:SF20 - FAST LEU-RICH DOMAIN-CONTAINING // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAAGAAGAAGAAAGGCTTGACAGGGGTGGGGTACACTATGCAGGTGTG
Internal bar code:ACTCTGGTAGTAGGTTCGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2625
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGAGCACGTAGGGGATG
Suggested primer 2:CGTTAGGTGCTGTGGTCAGT