Insertion junction: CLIP2.074419_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.074419
Chromosome:chromosome 8
Location:3036123
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g375150 (1 of 1) PF11904//PF12796 - GPCR-chaperone (GPCR_chapero_1) // Ankyrin repeats (3 copies) (Ank_2) 5'UTR
Cre08.g375200 (1 of 1) K07870 - Ras homolog gene family, member T1 (RHOT1, ARHT1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAACAACACCAACAGGGCAACTTGCACCGAAGCTTCGCCTGCGCGAGA
Internal bar code:GCCTCCTGAGTGTGTATGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1069
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGGATGTCGGTGTTAAGC
Suggested primer 2:TGGTGGACAGAGGTCAAGGA