Insertion junction: CLIP2.074428_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.074428
Chromosome:chromosome 3
Location:8436002
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g212977 (1 of 1) IPR000104//IPR000197 - Antifreeze protein, type I // Zinc finger, TAZ-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCGGTGACGGCTCGGCATGCCGCGTGTTGGCGACGCACTGGCGGAGT
Internal bar code:GTTGGTACTGTGAAGTCAGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:567
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGTCCTTGTACGGCATT
Suggested primer 2:ACCAACACCTACATCGCAGG