Insertion junction: CLIP2.074432_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074432
Chromosome:chromosome 1
Location:673986
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g003751 (1 of 6) IPR000595//IPR005821//IPR018490 - Cyclic nucleotide-binding domain // Ion transport domain // Cyclic nucleotide-binding-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGGGCCGTTCCGCCGCCGCTCCACGGAAAGCGCGGCGGCGCTGTCGC
Internal bar code:ATGTTTTGTGTGTATTACCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1639
LEAP-Seq percent confirming:47.0588
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTACCCCTTCAGTGGCTG
Suggested primer 2:GCTCAATTGAGATGCTGGCG