Insertion junction: CLIP2.074432_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.074432
Chromosome:chromosome 1
Location:675173
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g003751 (1 of 6) IPR000595//IPR005821//IPR018490 - Cyclic nucleotide-binding domain // Ion transport domain // Cyclic nucleotide-binding-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGCACCGAGCCTAAGCGGCTGGCGGCTTGGCTCTGCCGAGGTGGCGAG
Internal bar code:GTCGGGTTGGTCTAACCATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:280
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCACTGAAGGGGTACTG
Suggested primer 2:CTGCTTTTGGAACGCCGAAA