Insertion junction: CLIP2.074458_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074458
Chromosome:chromosome 9
Location:6229192
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g413500 GT90-16,GT90F16 (1 of 4) PTHR12203//PTHR12203:SF35 - KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED // SUBFAMILY NOT NAMED; GT90 family protein 16 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCCCACAGCTGCTCTCCAATGTAGTGAATGCTCATGGTTACCAAATT
Internal bar code:TAACGTTAGTGTAGTAGACGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:621
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCAAACTGCTCATGTGC
Suggested primer 2:CCGCACCTGCCTTCTTAAGA