Insertion junction: CLIP2.074464_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074464
Chromosome:chromosome 4
Location:379223
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217910 (1 of 25) PF00581 - Rhodanese-like domain (Rhodanese) 3'UTR
Cre04.g217911 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGATGGCTGCAAGCCGCTGGAGTAAAGCTCCGAAGCTGGGAGTAGGGAG
Internal bar code:GGCTATTATACGTACCGTTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3477
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTTCGTCAACTGCCGCTT
Suggested primer 2:CCTTTGCCTTTGCTGTCCAC