Insertion junction: CLIP2.074465_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.074465
Chromosome:chromosome 10
Location:6747381
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g467100 (1 of 1) PTHR31633//PTHR31633:SF1 - FAMILY NOT NAMED // H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCCGCCTCCGTAAGGGTCCGGGCCGTTGCCACTGGGCCCAGCCGGCG
Internal bar code:ATAGGATACACCGGGTATTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:190
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TATGTGGATGCATCTCCGGC
Suggested primer 2:AGCGCACTCCTTCACAATGA