Insertion junction: CLIP2.074477_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074477
Chromosome:chromosome 16
Location:294459
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g801865 (1 of 1) 1.14.11.42 - tRNA(Phe) (7-(3-amino-3-carboxypropyl)wyosine(37)-C(2))-hydroxylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGAAGTGAAGGCGTAGCCAGGAACAGTGGTAGCGCAAACGCGTTGTTA
Internal bar code:GGAGAATTCGAATAGCTGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:410
LEAP-Seq percent confirming:62.2222
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTGGAACCCACATCACG
Suggested primer 2:AGGAGGAGCAGGAGGAAGAG