Insertion junction: CLIP2.074488_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.074488
Chromosome:plastome
Location:59705
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802287 ChreCp023,atpE,2716972 ATP synthase epsilon chain; (1 of 1) K02114 - F-type H+-transporting ATPase subunit epsilon (ATPF1E, atpC) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTCAATTGCCATATATCGGAATATTCATATCCACCGACAAAAGGTTCT
Internal bar code:GTCCTGCGCCAAGTATGTGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:819
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAAAGGACGCTCTGGTGT
Suggested primer 2:TTATCACCGCAGCTTTGGGT