Insertion junction: CLIP2.074492_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.074492
Chromosome:chromosome 9
Location:5385033
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g408150 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCTGCCGTTCCCACCCTTACGCGCTCCCATGGGAGCCCACAACGGCT
Internal bar code:TGCTGAGGGAAGATAGTGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:417
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGACCATCAAGACGCAG
Suggested primer 2:TCAGCCGGATTCAGAGGAGA