Insertion junction: CLIP2.074495_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.074495
Chromosome:plastome
Location:21991
Confidence (%):40
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGGAGGCTGTTAAGCCTTGCACATAATCGGAAGGAGATACGAATATGA
Internal bar code:CGTGTGCCTGGATTGTGTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:266
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGACGTGGTGGAATATGCGT
Suggested primer 2:TAGGAAGCCCCTTTCCCCTT