Insertion junction: CLIP2.074502_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074502
Chromosome:chromosome 1
Location:3876869
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g025500 (1 of 1) PTHR19959//PTHR19959:SF135 - KINESIN LIGHT CHAIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAATGTGCAAAGGCGCTCCATAGCCGAGTTCAGGCCCCCCGTCACCGCT
Internal bar code:TTTTAAGACCTAATACAATGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1276
LEAP-Seq percent confirming:73.6842
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGACACCCCCAGCAAACA
Suggested primer 2:GGGTTCTGCCTGCTTTGTTG