Insertion junction: CLIP2.074503_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.074503
Chromosome:chromosome 9
Location:3575333
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396661 DUO3,DIV39 (1 of 2) IPR000104//IPR001005//IPR009057 - Antifreeze protein, type I // SANT/Myb domain // Homeodomain-like 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCGATGCCTCCCATCGCGAACCCGAGCCTGAGCAATGCACTGACAGT
Internal bar code:TGACCACTTCCACCCAGTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2473
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTCATCCGCCAGTTCCAGAA
Suggested primer 2:TCAGTCTGGGGAATGGCAAC