Insertion junction: CLIP2.074503_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.074503
Chromosome:chromosome 9
Location:3575335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396661 DUO3,DIV39 (1 of 2) IPR000104//IPR001005//IPR009057 - Antifreeze protein, type I // SANT/Myb domain // Homeodomain-like 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCAGCACAGCAGCAGCTGGTGAGGCCGGACCGCCGGAGCAACGAGGG
Internal bar code:TGACCACTTCCACCCAGTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1972
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGTCTGGGGAATGGCAAC
Suggested primer 2:GTCATCCGCCAGTTCCAGAA