Insertion junction: CLIP2.074517_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074517
Chromosome:chromosome 17
Location:1931876
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g709950 (1 of 1) K08272 - calcium binding protein 39 (CAB39, MO25) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAACACTCGGACAACTTGCTTCAGCAACGCCTGAGTCGGCGAGCTCAA
Internal bar code:ATTAGTATACGACTAGTGCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1081
LEAP-Seq percent confirming:67.4419
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCCGTTCATGCAGCGTAT
Suggested primer 2:CTCGCTAGGTCTTAAGCCCG