Insertion junction: CLIP2.074519_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074519
Chromosome:chromosome 13
Location:641970
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre13.g565950 (1 of 4) IPR001841//IPR018957 - Zinc finger, RING-type // Zinc finger, C3HC4 RING-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGACGGGGACATCCCCAGAATGACTTGGGCAGCTGGCACGCCGACGG
Internal bar code:TCTAATAATTCAATGGTTTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1593
LEAP-Seq percent confirming:44.7368
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTGAGCGACGTTGTACT
Suggested primer 2:TACTGGCTGTGCTGCTACAC