Insertion junction: CLIP2.074523_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.074523
Chromosome:chromosome 2
Location:7139196
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800255 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCAAACCCTAGCGTGGCCATGGGCCAGTGAACTAGGGATTGAGGGAA
Internal bar code:TAACCGTCATGGTCGGGTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2134
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTAGCCTGAGCCTTAGT
Suggested primer 2:TTTCACAGCGTTGCTTCAGC