Insertion junction: CLIP2.074528_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074528
Chromosome:chromosome 3
Location:9104786
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201103 RAA7 psaA mRNA trans-splicing factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGATAGAGCGTACTGCACAATGCGTCCACAGTCTGAGCAAGACGACGA
Internal bar code:TGATCCAGTCGGCCCTGACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:216
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TTTAACTCCCGCTCACCCAC
Suggested primer 2:CGGTGGAGTCAAGCGATGG