Insertion junction: CLIP2.074528_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.074528
Chromosome:chromosome 3
Location:9105325
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201103 RAA7 psaA mRNA trans-splicing factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCTAAGCTGGGCCCACTTTCTTTTGGGCCCCCATCGTACTCTCATTGA
Internal bar code:AGCGCTAACCTATCTTACGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:458
LEAP-Seq percent confirming:35.7143
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGGAGTCAAGCGATGG
Suggested primer 2:TTTAACTCCCGCTCACCCAC