Insertion junction: CLIP2.074529_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.074529
Chromosome:chromosome 17
Location:2239770
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g713000 3'UTR
Cre17.g713025 DNJ33 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED; DnaJ-like protein outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACACAGCGCATATGGTATCAAGCGCCGCAAACCGCGCAGCCCGCACT
Internal bar code:AATGATAATCTAGCAACTGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1279
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCAAAGCATATGAGCAGC
Suggested primer 2:TGCCCCAACTCGTGTCTTAC