Insertion junction: CLIP2.074536_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.074536
Chromosome:chromosome 2
Location:3574317
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099500 CVL1 Fe2+/Mn2+ transporter, VIT1/CCC1 family; (1 of 2) PF01988 - VIT family (VIT1) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTACATATTACATACCGCTATCAGCTCTTAGCGTTGATCAGCGCTAAC
Internal bar code:AACAGGTAGTTTTAGTATGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1842
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCACCGGTACTCACTGTG
Suggested primer 2:AGTAGAGGTCTCGCGTGTCT