Insertion junction: CLIP2.074537_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.074537
Chromosome:chromosome 9
Location:3112124
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394139 3'UTR
Cre09.g394176 (1 of 21) IPR000679 - Zinc finger, GATA-type 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTGTGCAATGCTGAGCTGCAGCGGAAATTGGCACCCCCGGACCCGTCA
Internal bar code:GCGTGGCCGCCAGCCAACTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:703
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAGTTCCGCAACACTCGT
Suggested primer 2:TGGAGCCAACCAAATTTGCG