Insertion junction: CLIP2.074542_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.074542
Chromosome:chromosome 16
Location:898769
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648150 (1 of 6) PTHR24114//PTHR24114:SF2 - FAMILY NOT NAMED // LEUCINE-RICH REPEAT-CONTAINING PROTEIN 74 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGTGTTATCTGCAGTGCTCACAGTCTTCAGTGCAATGCCGAGTCTCCA
Internal bar code:TTGCGCACCAGTGTGTCCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:242
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTTGCAGCAGGAAGAGC
Suggested primer 2:CCGATCTGTACCGTACTGCC