Insertion junction: CLIP2.074551_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.074551
Chromosome:chromosome 12
Location:5078796
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g525600 (1 of 8) IPR001810//IPR006553 - F-box domain // Leucine-rich repeat, cysteine-containing subtype outside_mRNA
Cre12.g525650 SUFS,SUFS1,CSD4 (1 of 1) K11717 - cysteine desulfurase / selenocysteine lyase (sufS); Group II cysteine desulfurase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCCATATGTCCTTGGTAATATTGAAGCGTCGGTCTGCGGCATGACGCC
Internal bar code:TTCGTTAGTCCAACGTGTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2747
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGGGAGGGGAGAGGGAGA
Suggested primer 2:AGGAGTGGATGAGCAGGGAT