Insertion junction: CLIP2.074552_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074552
Chromosome:chromosome 1
Location:2444968
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g014150 MFT5:MAE5,MFT5,MAE5 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGTAAAACATCCCCTGTAGGGTACGTCTGAGACACGTACCCTTAAAA
Internal bar code:TGCGGTGGCAGAAGAGTATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:711
LEAP-Seq percent confirming:98.2456
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGGCAGTGTGGCAGCATT
Suggested primer 2:CTCTGCCTGTGTCGTTTTGC