Insertion junction: CLIP2.074562_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.074562
Chromosome:chromosome 16
Location:295050
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g801865 (1 of 1) 1.14.11.42 - tRNA(Phe) (7-(3-amino-3-carboxypropyl)wyosine(37)-C(2))-hydroxylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCCGCCTGCTGCCGCGCAGGGTTCCGCCCAGGTGCTTGTGGAGGTGC
Internal bar code:AATCGTGGTGTCAAAAATTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:503
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGACACGCATGCAAGACAGA
Suggested primer 2:AGCAAATGTGGTGGAGGGAG