Insertion junction: CLIP2.074583_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.074583
Chromosome:chromosome 8
Location:1462277
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g364700 (1 of 7) PF00076//PF14259 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTGACCAAGGGGTTTGAGCTAGCCGTAATACGGTGTCATGTAAGGCC
Internal bar code:CATGTGCGGCGGCAACGTTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4042
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:TGATACAGCTGGAGTCCCGA
Suggested primer 2:ACAGCACGCTAGAAGCTTGT