Insertion junction: CLIP2.074589_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074589
Chromosome:chromosome 2
Location:1831855
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g087050 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAGGGTACGTGTAGTGTGCGCGCGAGGTAGGGCACGTGAGCTGTGCGG
Internal bar code:TGAGTAAGGCTCGACTGTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2483
LEAP-Seq percent confirming:31.25
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:77
LEAP-Seq n unique pos:112

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGATTGGGAATCACACGT
Suggested primer 2:ACCCTAGCTAGGTTCCCGTT