Insertion junction: CLIP2.074592_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.074592
Chromosome:chromosome 3
Location:7633926
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g204400 (1 of 1) K09651 - rhomboid domain-containing protein 1 [EC:3.4.21.-] (RHBDD1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAGGCGCCAGCGGCGCCCGAGGCCGCGGCGGAATGGCACCGGCCGCTG
Internal bar code:AACTTAAATCACATCGTGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:437
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGTGTGTAGGGAGGG
Suggested primer 2:TTCGCAGTTCACGGTATGCT